Meets Thursday 10.00-11:00 AM Physics Room 1131

Instructor: Prof. Keith Lidke

Room 1140, Physics and Astronomy
phone: (505)277-0302


The format will be one ~ 30 minute presentation per week of either a research report or a journal paper presentation. Topics will be any aspect of fluorescence super-resolution imaging, single particle tracking, single molecule imaging or spectral imaging. We may also have a few full-hour talks by external speakers during the semester.

Registration is not required for attendance or participation, but please register if you can.


Credit for the seminar requires attendance and one research or journal presentation.

Fall Semester Schedule

Date Presenter Topic Compute Topic
18-Jan Organizational Meeting
25-Jan Mohamad Fazel Journal Paper: A hidden Markov model approach to characterizing the photo-switching behavior of fluorophores
1-Feb Biophysical Society Meeting Talks
8-Feb David Schodt Journal Paper: A simple and powerful analysis of lateral suvdiffusion using single particle tracking
15-Feb Biophysical Society Meeting Talks II
22-Feb TBD
1-Mar Biophysical Society Meeting Discussion
8-Mar Sandeep Pallikkuth Journal Paper: Super-resolution microscopy reveals that disruption of ciliary transition-zone architecture causes Joubert syndrome
15-Mar Spring break
22-Mar Xuefeng Li Journal Paper: Label-Free Single-Molecule Imaging with Numerical-Aperture-Shaped Interferometric Scattering Microscopy
29-Mar Hanieh Mazloom Farsibaf Journal Paper: Transmembrane Pickets Connect Cyto- and Pericellular Skeletons Forming Barriers to Receptor Engagement
29-Mar Keith Lidke Journal Paper: TBD
29-Mar Sandeep Pallikkuth Journal Papers: Enhanced labeling density and whole-cell 3D dSTORM imaging by repetitive labeling of target proteins
Identification of Individual Immobilized DNA Molecules by Their Hybridization Kinetics Using Single-Molecule Fluorescence Imaging
19-Apr Mohamad Fazel Journal Paper: Local dimensionality determines imaging speed in localization microscopy
26-Apr Farzin Farzam Research Talk: TBD
3-May Hanieh Mazloom Farsibaf Research Talk: TBD